Computational modeling and analysis of the yeast FLR1 regulatory network in mancozeb-challenged cellsPedro T. Monteiro, Paulo Jorge Dias, Delphine Ropers, Arlindo L. Oliveira, Isabel Sá‐Correia, Miguel C. Teixeira, Ana T. FreitasHAL (Le Centre pour la Communication Scientifique Directe) preprint
Improved Model Checking Techniques for State Space Analysis of Gene Regulatory NetworksHelio Pais, Kenneth L. McMillan, Ellen Sentovich, Ana T. Freitas, Arlindo L. OliveiraIGI Global eBooks book
Using graph modularity analysis to identify transcription factor binding sitesAlexandre P. Francisco, Sophie Schbath, Ana T. Freitas, Arlindo L. Oliveira preprint
Mining Large Query Induced Graphs towards a Hierarchical Query FolksonomyAlexandre P. Francisco, Ricardo Baeza‐Yates, Arlindo L. OliveiraLecture notes in computer science book
Parallel and Distributed Compressed IndexesLuís M. S.Russo, Gonzalo Navarro, Arlindo L. OliveiraLecture notes in computer science book
Refining current knowledge on the yeast FLR1 regulatory network by combined experimental and computational approachesMiguel C. Teixeira, Paulo Jorge Dias, Pedro T. Monteiro, Adrien Sala, Arlindo L. Oliveira, Ana T. Freitas, Isabel Sá‐CorreiaMolecular BioSystems journal
Haplotype Inference by Pure Parsimony: A SurveyAna Graça, Inês Lynce, João Marques‐Silva, Arlindo L. OliveiraJournal of Computational Biology journal
A Data Mining Approach for the Detection of High-Risk Breast Cancer GroupsOrlando Anunciação, Bruno Costa Gomes, Susana Vinga, Jorge Gaspar, Arlindo L. Oliveira, José RueffAdvances in intelligent and soft computing book
YEASTRACT: providing a programmatic access to curated transcriptional regulatory associations in Saccharomyces cerevisiae through a web services interfaceD. Abdulrehman, Pedro T. Monteiro, Miguel C. Teixeira, Nuno P. Mira, Artur B. Lourenço, Sandra C. dos Santos, Tânia R. Cabrito, Alexandre P. Francisco, Sara C. Madeira, R. S. Aires, Arlindo L. Oliveira, Isabel Sá‐Correia, Ana T. FreitasNucleic Acids Research journal