Arlindo L. Oliveira

Faculty

machine learning · bioinformatics · computational biology

Publications

2007

YEASTRACT-DISCOVERER: new tools to improve the analysis of transcriptional regulatory associations in Saccharomyces cerevisiae

Pedro T. Monteiro, Nuno D. Mendes, Miguel C. Teixeira, Sofia d'Orey, Sandra Tenreiro, Nuno P. Mira, Helio Pais, Alexandre P. Francisco, Alexandra M. Carvalho, Artur B. Lourenço, Isabel Sá‐Correia, Arlindo L. Oliveira, Ana T. Freitas

Nucleic Acids Research journal

2006

An efficient algorithm for the identification of structured motifs in DNA promoter sequences

Carvalho, A.M., Freitas, A.T., Arlindo L. Oliveira, Sagot, M.-F.

HAL (Le Centre pour la Communication Scientifique Directe) conference

Additional materials and results for MUSA

Nuno D. Mendes, Ana Casimiro, Pedro M. Santos, Arlindo L. Oliveira, Ana T. Freitas

conference

Probabilistic Testability Analysis and DFT Methods at RTL

J. Fernandes, Marcelino Santos, Arlindo L. Oliveira, João Teixeira

conference

Efficient generation of super condensed neighborhoods

Luís M. S.Russo, Arlindo L. Oliveira

Journal of Discrete Algorithms journal

DFT and Probabilistic Testability Analysis at RTL

José M. Fernandes, Marcelino Santos, Arlindo L. Oliveira, J.P. Teixeira

Proceedings journal

Empirical Evaluation of Centroid-based Models for Single-label Text Categorization

Ana Cardoso-Cachopo, Arlindo L. Oliveira, Rua Alves Redol

conference

Dotted Suffix Trees A Structure for Approximate Text Indexing

Luís Pedro Coelho, Arlindo L. Oliveira

Lecture notes in computer science book

A Compressed Self-index Using a Ziv-Lempel Dictionary

Luís M. S.Russo, Arlindo L. Oliveira

Lecture notes in computer science book

MUSA: a parameter free algorithm for the identification of biologically significant motifs

Nuno D. Mendes, Ana Casimiro, Pedro M. Santos, Isabel Sá‐Correia, Arlindo L. Oliveira, Ana T. Freitas

Bioinformatics journal

An Efficient Algorithm for the Identification of Structured Motifs in DNA Promoter Sequences

Alexandra M. Carvalho, Ana T. Freitas, Arlindo L. Oliveira, Marie‐France Sagot

IEEE/ACM Transactions on Computational Biology and Bioinformatics journal

2005

Faster Generation of Super Condensed Neighbourhoods Using Finite Automata

Luís M. S.Russo, Arlindo L. Oliveira

Lecture notes in computer science book

Using a More Powerful Teacher to Reduce the Number of Queries of the L* Algorithm in Practical Applications

André L. Martins, H. Sofia Pinto, Arlindo L. Oliveira

Lecture notes in computer science book

An Efficient Algorithm for Generating Super Condensed Neighborhoods

Luís M. S.Russo, Arlindo L. Oliveira

Lecture notes in computer science book

Constraint Relaxations for Discovering Unknown Sequential Patterns

Cláudia Antunes, Arlindo L. Oliveira

Lecture notes in computer science book

A HIGHLY SCALABLE ALGORITHM FOR THE EXTRACTION OF CIS-REGULATORY REGIONS

Alexandra M. Carvalho, Ana T. Freitas, Arlindo L. Oliveira, Marie‐France Sagot

preprint

Inference of regular languages using state merging algorithms with search

Miguel Bugalho, Arlindo L. Oliveira

Pattern Recognition journal

A Linear Time Biclustering Algorithm for Time Series Gene Expression Data

Sara C. Madeira, Arlindo L. Oliveira

Lecture notes in computer science book

2004

UN MODELO DE RECUPERACIÓN DE INFORMACIÓN BASADO EN SVMs INFORMATION RETRIEVAL MODEL BASED ON SVMS

Mora Maldonado, Arlindo L. Oliveira, Jorge Sánchez

conference

Special issue on string processing and information retrieval

Alberto H. F. Laender, Arlindo L. Oliveira

Journal of Discrete Algorithms journal

Un modelo de recuperación de información basado en SVMs

Fernanda Maldonado Naude, Arlindo L. Oliveira, J. Alfredo Sánchez

conference

A New Quick Point Location Algorithm

José Poveda, Michael Gould, Arlindo L. Oliveira

Lecture notes in computer science book

Metrics for Grid Applicability: A Distributed Elliptic Curve Platform Assessment

Paulo Trezentos, Arlindo L. Oliveira

Lecture notes in computer science book

Towards Automatic Learning of a Structure Ontology For Technical Articles

André L. Martins, H. Sofia Pinto, Arlindo L. Oliveira

conference

Mining Patterns Using Relaxations of User Defined Constraints

Cláudia Antunes, Arlindo L. Oliveira, Técnico Inesc-id

conference

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